BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H10LP1|AL428464
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1640 0.0
>3x_Contig1795
Length = 38452
Score = 1640 bits (821), Expect = 0.0
Identities = 851/865 (98%), Gaps = 2/865 (0%)
Strand = Plus / Plus
Query: 1 gatcctgttacagcggataacaatcctctcttacaggccaggacttcggaaagtgttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 gatcctgttacagcggataacaatcctctcttacaggccaggacttcggaaagtgttagt 1355
Query: 61 tctgggaagaaaagcaaagagaccagagatgaagatgagccagamaagcttcccgacgtg 120
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 1356 tctgggaagaaaagcaaagagaccagagatgaagatgagcaagaaaagcttcccgacgtg 1415
Query: 121 attcctgtyagtgctgcycagaatgttgtgaaaatgtctccaccaaacaaggagggtgcc 180
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 attcctgttagtgctgctcagaatgttgtgaaaatgtctccaccaaacaaggagggtgcc 1475
Query: 181 attgacaatattccgttagaggtgcttgatccgaagaggttcaaaagagcccctccaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 attgacaatattccgttagaggtgcttgatccgaagaggttcaaaagagcccctccaagg 1535
Query: 241 gaaagtmatatggtggacacttcaattgatacggcmacgtatcgggcagatcaacagaag 300
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1536 gaaagtaatatggtggacacttcaattgatacggcaacgtatcgggcagatcaacagaag 1595
Query: 301 attgagagcctcactaagagtattgaagaggagaaacctgaatatttgttcccctggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 attgagagcctcactaagagtattgaagaggagaaacctgaatatttgttcccctggttc 1655
Query: 361 tctgttggaggatttaatgtagtcaagaatcctgctactcagatgamatcctctcgtgtt 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1656 tctgttggaggatttaatgtagtcaagaatcctgctactcagatgaaatcctctcgtgtt 1715
Query: 421 gtgaagtcgtatgtcgtggaaacactactacaacgattggtatagtaacactgcyggtgt 480
|||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 1716 gtgaagtcgtatgttgtggaaa-actactacaacgattggtatagtaacactgctggtgt 1774
Query: 481 tgtcggtacttgcttcttctcttggttacyttcttacttgaacttttcatggtggtcctt 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1775 tgtcggtacttgcttcttctcttggttactttcttacttgaacttttcatggtggtcctt 1834
Query: 541 gggatttgtgttcttttgcactgcatccgtgtatagagcagagttccgtcgattcaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1835 gggatttgtgttcttttgcactgcatccgtgtatagagcagagttccgtcgattcaatag 1894
Query: 601 amacattagagacgatatgamaagaatcaccgctcgaagagaccttgagcgaccgtaccg 660
| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1895 aaacattagagacgatatgaaaagaatcaccg-tcgaagagaccttgagcgaccgtaccg 1953
Query: 661 aaagttcagtatggctgaactccttcctatccaagttctggacaatttatatgccagttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 aaagttcagtatggctgaactccttcctatccaagttctggacaatttatatgccagttt 2013
Query: 721 tgtcccaacaagttaaggatgcagttaatccacagttagctggtgtcgctcctgggtacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 tgtcccaacaagttaaggatgcagttaatccacagttagctggtgtcgctcctgggtacg 2073
Query: 781 gtattgacgcgttgtccttgaatgaattcactcttggtaccaaggctccaaccattgatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 gtattgacgcgttgtccttgaatgaattcactcttggtaccaaggctccaaccattgatg 2133
Query: 841 ccattaaatcgtacaccaagaaagg 865
|||||||||||||||||||||||||
Sbjct: 2134 ccattaaatcgtacaccaagaaagg 2158
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4738
Number of Sequences: 1807
Number of extensions: 4738
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)